iqtree

What dose the model SYM+ASC+R10 mean? #238

Answered by roblanf

Fisher909 asked this question in Q&A

Fisher909
Jun 19, 2024

What dose the model SYM+ASC+R10 mean?

Answered by roblanf

SYM: "Symmetric model with unequal rates but equal base freq."
ASC: Ascertainment Bias Correction (for when you don't have the constant sites in your alignment)
R10: free-rate distribution with 10 parameters

All of these are covered in the documentation here: http://www.iqtree.org/doc/Substitution-Models

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roblanf
Jun 20, 2024
Maintainer

SYM: "Symmetric model with unequal rates but equal base freq."
ASC: Ascertainment Bias Correction (for when you don't have the constant sites in your alignment)
R10: free-rate distribution with 10 parameters

All of these are covered in the documentation here: http://www.iqtree.org/doc/Substitution-Models

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