Updated Setting the Parameters (markdown)

sarah-haynes committed Feb 3, 2021

Update the default value of write_calibrated_mgf

fcyu committed Jan 4, 2021

Add more explanations to decoy_prefix.

fcyu committed Feb 7, 2020

Add more explanation to decoy_prefix parameter.

fcyu committed Feb 7, 2020

Update some parameters according to 2.3.

fcyu committed Jan 30, 2020

Add write_calibrated_mgf. Change allow_multiple_variable_mods_on_residue's default value to 0. Improve a description.

fcyu committed Nov 5, 2019

Updated Setting the Parameters (markdown)

sarah-haynes committed Oct 31, 2019

add link to parameter files

sarah-haynes committed Oct 31, 2019

Add three new parameters.

fcyu committed Sep 2, 2019

Updated Setting the Parameters (markdown)

sarah-haynes committed Aug 30, 2019

Updated Setting the Parameters (markdown)

sarah-haynes committed Aug 19, 2019

linked to list of enzymes on PeptideProphet page of Philosopher wiki

sarah-haynes committed Aug 15, 2019

Add excluded_scan_list_file parameter.

fcyu committed Jul 4, 2019

precursor_charge description

sarah-haynes committed Jul 2, 2019

Change the explanation about the precursor_charge

fcyu committed Jun 29, 2019

precursor_charge description

sarah-haynes committed Jun 28, 2019

routine

guoci committed May 23, 2019