From 7ff9e685601f0f74546b953f300fea9514adcbd7 Mon Sep 17 00:00:00 2001
From: jkgoodrich <33063077+jkgoodrich@users.noreply.github.com>
Date: Thu, 4 May 2023 10:54:16 -0600
Subject: [PATCH] Add global annotations for 'vep_version', 'vep_help', and
 'vep_config' to the returned Table in `vep_or_lookup_vep`

---
 gnomad/utils/vep.py | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/gnomad/utils/vep.py b/gnomad/utils/vep.py
index c0135003d..47741fbe4 100644
--- a/gnomad/utils/vep.py
+++ b/gnomad/utils/vep.py
@@ -235,6 +235,10 @@ def vep_or_lookup_vep(
     if "vep_proc_id" in list(vep_ht.row):
         vep_ht = vep_ht.drop("vep_proc_id")
 
+    vep_ht = vep_ht.annotate_globals(
+        vep_version=f"v{vep_version}", vep_help=vep_help, vep_config=vep_config
+    )
+
     return vep_ht.union(revep_ht)