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Turn on test_run tests for usafacts #399

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Merged
merged 3 commits into from
Oct 29, 2020
Merged

Turn on test_run tests for usafacts #399

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4570423
turn on usafacts::test_run
sgsmob Oct 28, 2020
e18c6f6
Merge branch 'main' of github.com:cmu-delphi/covidcast-indicators int…
sgsmob Oct 28, 2020
455f1dc
lint compliance
sgsmob Oct 28, 2020
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34 changes: 16 additions & 18 deletions usafacts/tests/test_run.py
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Original file line number Diff line number Diff line change
@@ -1,16 +1,16 @@
import pytest

"""Tests for running the USAFacts indicator."""
from itertools import product
from os import listdir
from os.path import join

import pandas as pd
from delphi_usafacts.run import run_module


class TestRun:
"""Tests for the `run_module()` function."""
def test_output_files_exist(self, run_as_module):

csv_files = listdir("receiving")
"""Test that the expected output files exist."""
csv_files = [f for f in listdir("receiving") if f.endswith(".csv")]

dates = [
"20200229",
Expand All @@ -23,30 +23,28 @@ def test_output_files_exist(self, run_as_module):
"20200307",
"20200308",
"20200309",
"202003010",
"20200310",
]
geos = ["county", "hrr", "msa", "state"]
metrics = [
"deaths_cumulative_num",
"deaths_incidence_num",
"deaths_incidence_prop",
"confirmed_cumulative_num",
"confirmed_incidence_num",
"confirmed_incidence_prop",
"deaths_7dav_cumulative_prop",
"confirmed_7dav_cumulative_prop",
]

# enumerate metric names.
metrics = []
for event, span, stat in product(["deaths", "confirmed"],
["cumulative", "incidence"],
["num", "prop"]):
metrics.append("_".join([event, span, stat]))
metrics.append("_".join([event, "7dav", span, stat]))

expected_files = []
for date in dates:
for geo in geos:
for metric in metrics:
expected_files += [date + "_" + geo + "_" + metric + ".csv"]

set(csv_files) == set(expected_files)
assert set(csv_files) == set(expected_files)

def test_output_file_format(self, run_as_module):

"""Test that the output files have the proper format."""
df = pd.read_csv(
join("receiving", "20200310_state_confirmed_cumulative_num.csv")
)
Expand Down