gcc and glibc v4.x

[ipatch]

Additional Info

• I am using Windows Subsystem for Linux

Output of brew config

HOMEBREW_VERSION: 4.4.26-92-g95fd892
ORIGIN: https://github.com/Homebrew/brew
HEAD: 95fd892fb1b5866c4f71b345d6d0b5a477f3ee4f
Last commit: 30 hours ago
Branch: master
Core tap origin: https://github.com/ipatch/homebrew-core.git
Core tap HEAD: b96b6094b8a6c24f0173aa557a0dea5aed554f50
Core tap last commit: 32 hours ago
HOMEBREW_PREFIX: /home/capin/homebrew
HOMEBREW_REPOSITORY: /home/capin/homebrew
HOMEBREW_CELLAR: /home/capin/homebrew/Cellar
HOMEBREW_CACHE: /home/capin/homebrew/cache
HOMEBREW_CASK_OPTS: []
HOMEBREW_DEVELOPER: set
HOMEBREW_DISPLAY: :0
HOMEBREW_EDITOR: nvim
HOMEBREW_GITHUB_API_TOKEN: set
HOMEBREW_MAKE_JOBS: 8
HOMEBREW_NO_ANALYTICS: set
HOMEBREW_NO_AUTOREMOVE: set
HOMEBREW_NO_AUTO_UPDATE: set
HOMEBREW_NO_GITHUB_API: set
HOMEBREW_NO_INSTALL_CLEANUP: set
HOMEBREW_NO_INSTALL_FROM_API: set
HOMEBREW_SORBET_RUNTIME: set
HOMEBREW_TEMP: /opt/tmp/homebrew
Homebrew Ruby: 3.3.7 => /home/capin/homebrew/Library/Homebrew/vendor/portable-ruby/3.3.7/bin/ruby
CPU: octa-core 64-bit haswell
Clang: 19.1.7
Git: 2.49.0 => /bin/git
Curl: 8.12.1 => /bin/curl
Kernel: Linux 6.12.19-1-lts x86_64 GNU/Linux
OS: Arch Linux
Host glibc: 2.41
/usr/bin/gcc: 14.2.1
/usr/bin/ruby: 3.3.7
glibc: N/A
gcc@11: N/A
gcc: 14.2.0_1
xorg: N/A

Output of brew doctor

Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry or file an issue; just ignore this. Thanks!

Warning: Suspicious https://github.com/Homebrew/homebrew-core git origin remote found.
The current git origin is:
  https://github.com/ipatch/homebrew-core.git

With a non-standard origin, Homebrew won't update properly.
You can solve this by setting the origin remote:
  git -C "/home/capin/homebrew/Library/Taps/homebrew/homebrew-core" remote set-url origin https://github.com/Homebrew/homebrew-core

Warning: Some installed kegs have no formulae!
This means they were either deleted or installed manually.
You should find replacements for the following formulae:
  python-ply

Warning: Some installed formulae are deprecated or disabled.
You should find replacements for the following formulae:
  [email protected]_py312
  icu4c@75
  [email protected]
  mesalib-glw
  [email protected]

Warning: You have the following deprecated, official taps tapped:
  Homebrew/homebrew-bundle
  Homebrew/homebrew-services
Untap them with `brew untap`.

Warning: The following formulae have the same name as core formulae:
  blacktop/tap/go
  blacktop/tap/ipsw
  blacktop/tap/syft
  ipatch/us-05/emscripten
  ipatch/us-05/llvm@13
  ipatch/us-05/node
  ipatch/us-05/numpy
  ipatch/us-05/openblas
  ipatch/us-05/openssh
  ipatch/us-05/qt@5
  ipatch/us-05/tree-sitter
  ipatch/us-05/yuicompressor
  thii/unxip/unxip
Some of these can be resolved with:
  brew untap blacktop/tap

Warning: You have external commands with conflicting names.
Found command `brew-install-asahi` in the following places:
  /home/capin/homebrew/Library/Taps/ipatch/homebrew-us-05/cmd/brew-install-asahi.rb
  /home/capin/homebrew/Library/Taps/ipatch/us05/cmd/brew-install-asahi.rb

Warning: Unbrewed header files were found in /usr/local/include.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected header files:
  /usr/local/include/libideviceactivation.h

Warning: Unbrewed '.la' files were found in /usr/local/lib.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected '.la' files:
  /usr/local/lib/libideviceactivation-1.0.la

Warning: Unbrewed '.pc' files were found in /usr/local/lib/pkgconfig.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected '.pc' files:
  /usr/local/lib/pkgconfig/libideviceactivation-1.0.pc

Warning: Unbrewed static libraries were found in /usr/local/lib.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected static libraries:
  /usr/local/lib/libideviceactivation-1.0.a

Warning: You have unlinked kegs in your Cellar.
Leaving kegs unlinked can lead to build-trouble and cause formulae that depend on
those kegs to fail to run properly once built. Run `brew link` on these:
  qt
  pyside
  librsvg
  pygments
  pcre2
  glib-networking
  pyside6_py312
^C
╭─capin at rogue in /opt/code/dotfiles (dev.evergreen ✔)
╰─λ brew doctor
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry or file an issue; just ignore this. Thanks!

Warning: Suspicious https://github.com/Homebrew/homebrew-core git origin remote found.
The current git origin is:
  https://github.com/ipatch/homebrew-core.git

With a non-standard origin, Homebrew won't update properly.
You can solve this by setting the origin remote:
  git -C "/home/capin/homebrew/Library/Taps/homebrew/homebrew-core" remote set-url origin https://github.com/Homebrew/homebrew-core

Warning: Some installed kegs have no formulae!
This means they were either deleted or installed manually.
You should find replacements for the following formulae:
  python-ply

Warning: Some installed formulae are deprecated or disabled.
You should find replacements for the following formulae:
  [email protected]_py312
  icu4c@75
  [email protected]
  mesalib-glw
  [email protected]

Warning: You have the following deprecated, official taps tapped:
  Homebrew/homebrew-bundle
  Homebrew/homebrew-services
Untap them with `brew untap`.

Warning: The following formulae have the same name as core formulae:
  blacktop/tap/go
  blacktop/tap/ipsw
  blacktop/tap/syft
  ipatch/us-05/emscripten
  ipatch/us-05/llvm@13
  ipatch/us-05/node
  ipatch/us-05/numpy
  ipatch/us-05/openblas
  ipatch/us-05/openssh
  ipatch/us-05/qt@5
  ipatch/us-05/tree-sitter
  ipatch/us-05/yuicompressor
  thii/unxip/unxip
Some of these can be resolved with:
  brew untap blacktop/tap

Warning: You have external commands with conflicting names.
Found command `brew-install-asahi` in the following places:
  /home/capin/homebrew/Library/Taps/ipatch/homebrew-us-05/cmd/brew-install-asahi.rb
  /home/capin/homebrew/Library/Taps/ipatch/us05/cmd/brew-install-asahi.rb

Warning: Unbrewed header files were found in /usr/local/include.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected header files:
  /usr/local/include/libideviceactivation.h

Warning: Unbrewed '.la' files were found in /usr/local/lib.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected '.la' files:
  /usr/local/lib/libideviceactivation-1.0.la

Warning: Unbrewed '.pc' files were found in /usr/local/lib/pkgconfig.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected '.pc' files:
  /usr/local/lib/pkgconfig/libideviceactivation-1.0.pc

Warning: Unbrewed static libraries were found in /usr/local/lib.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae and may need to be deleted.

Unexpected static libraries:
  /usr/local/lib/libideviceactivation-1.0.a

Warning: You have unlinked kegs in your Cellar.
Leaving kegs unlinked can lead to build-trouble and cause formulae that depend on
those kegs to fail to run properly once built. Run `brew link` on these:
  qt
  pyside
  librsvg
  pygments
  pcre2
  glib-networking
  pyside6_py312

Warning: You have uncommitted modifications to Homebrew/homebrew-cask.
If this is a surprise to you, then you should stash these modifications.
Stashing returns Homebrew to a pristine state but can be undone
should you later need to do so for some reason.
  cd /home/capin/homebrew/Library/Taps/homebrew/homebrew-cask && git stash -u && git clean -d -f

Uncommitted files:
  M  .github/autobump.txt
  M  Casks/a/airdroid.rb
  M  Casks/a/android-studio.rb
  M  Casks/a/appflowy.rb
  M  Casks/b/badgeify.rb
  M  Casks/b/bettertouchtool.rb
  UU Casks/b/[email protected]
  M  Casks/c/chatgpt.rb
  M  Casks/c/chatwise.rb
  M  Casks/c/cherry-studio.rb
  M  Casks/c/chromedriver.rb
  M  Casks/d/[email protected]
  M  Casks/d/djstudio.rb
  M  Casks/d/downie.rb
  M  Casks/e/ea.rb
  M  Casks/e/[email protected]
  UU Casks/f/flutterflow.rb
  M  Casks/f/flyenv.rb
  UU Casks/f/framer.rb
  M  Casks/g/google-chrome.rb
  M  Casks/g/google-cloud-sdk.rb
  M  Casks/g/grandtotal.rb
  M  Casks/j/jbrowse.rb
  M  Casks/l/logos.rb
  M  Casks/l/lookaway.rb
  M  Casks/m/macai.rb
  M  Casks/m/macwhisper.rb
  M  Casks/m/meld-studio.rb
  UU Casks/m/[email protected]
  M  Casks/m/midi-router-client.rb
  M  Casks/m/[email protected]
  M  Casks/m/morgen.rb
  M  Casks/o/ollama.rb
  M  Casks/o/ontime.rb
  M  Casks/o/[email protected]
  M  Casks/o/openshift-client.rb
  M  Casks/p/[email protected]
  M  Casks/p/pieces-os.rb
  M  Casks/p/pieces.rb
  M  Casks/p/pitch.rb
  M  Casks/p/postman.rb
  UU Casks/r/reader.rb
  M  Casks/r/replaywebpage.rb
  M  Casks/r/roam.rb
  M  Casks/r/rustrover.rb
  UU Casks/s/segger-jlink.rb
  M  Casks/s/simply-fortran.rb
  UU Casks/s/[email protected]
  M  Casks/t/teleport-connect.rb
  M  Casks/t/teleport.rb
  M  Casks/t/tuta-mail.rb
  M  Casks/v/[email protected]
  M  Casks/v/[email protected]
  M  Casks/v/[email protected]
  UU Casks/z/zed.rb
  UU Casks/z/[email protected]
  M  Casks/z/[email protected]

Warning: Your Homebrew's prefix is not /home/linuxbrew/.linuxbrew.

Many of Homebrew's bottles (binary packages) can only be used with the default prefix.
Consider uninstalling Homebrew and reinstalling into the default prefix.
It is expected behaviour that some formulae will fail to build in this unsupported configuration.
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Warning: Some taps are not on the default git origin branch and may not receive
updates. If this is a surprise to you, check out the default branch with:
  git -C $(brew --repo ipatch/deleteme) checkout

Warning: Broken symlinks were found. Remove them with `brew cleanup`:
  /home/capin/homebrew/etc/bash_completion.d/brew-services
  /home/capin/homebrew/share/zsh/site-functions/_brew_services

Description of issue

heads up for anybody running brew / homebrew in a non standard prefix. personally i run homebrew setup in ~/homebrew. that said i run homebrew on arch linux. arch linux has since upgraded glibc to version 4.x i believe i'm specifically on 4.1.x something. and building packages / formula from source using gcc will fail due to a fix up header thing that's been lingering around in gcc. i assume the bottles built on linux are using ubuntu with glibc version that hasn't quite got to the v4.x series.

Homebrew/homebrew-core@master...ipatch:homebrew-core:ipatch.archlinux.gcc-v14

heres copypasta from the modfied gcc version i have in my fork. the quick fix is to remove the offending directory included the gcc installation. this issue only really arises when one is building formula from source and using the gcc version provided by homebrew.

links pasted below describe the issue in further detail, just thought i'd share cuz i guess ubuntu and homebrew will eventually get to glibc v4.x or maybe gcc will have fixed their build process by then, (who knows) 🤷‍♂️

# NOTE: ipatch, disable fix includes
    # see: https://bugs.gentoo.org/933282
    # see: https://gcc.gnu.org/bugzilla/show_bug.cgi?id=118009#c4
    if OS.linux?
      args << "--disable-fixincludes"
    end

[carlocab]

Thanks for the notice. Can you try Homebrew/homebrew-core#216916 to see if that helps?

[ipatch]

no prob. i'll try later today when i get home from work.