mapdeduce

A python library for:

• Handling antigenic maps and sequence data.
• Testing associations between amino acid polymorphisms and antigenic diversity.
• Plotting antigenic maps.

Installation

# An R dependency
Rscript -e 'install.packages("statmod")'

# The python package
pip install git+https://github.com/acorg/mapdeduce.git

R is also required, with the "statmod" library.