iModMixData is an R package that provides example datasets for the iModMix package. It includes partial correlation data for genes, metabolites, and proteins, useful for multi-omics integration and analysis.
You can install the development version of iModMixData from GitHub using:
# install.packages("devtools")
devtools::install_github("biodatalab/iModMixData")Load the package and access the datasets:
library(iModMixData)
# Load gene correlation data
genes <- loadPartialCorGenes()
head(genes)
# Load metabolite correlation data
metabolites <- loadPartialCorMetabolites()
head(metabolites)
# Load protein correlation data
proteins <- loadPartialCorProt()
head(proteins)PartialCorGenes: Partial correlation matrix for genes. PartialCorMetabolites: Partial correlation matrix for metabolites. PartialCorProt: Partial correlation matrix for proteins.
If you use this package in your work, please cite:
Narvaez-Bandera, I. (2025). iModMixData: Example Data for iModMix. GitHub repository: https://github.com/biodatalab/iModMixData
This package is licensed under the GPL-3 License.