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very first implementation of the parallel topology optimization Build and test #36: Commit d13e76f pushed by trongnhanuit
1d 0h 0m 1s parallelization
parallelization
1d 0h 0m 1s
Rename alignment sequences in the same way as leaves on input tree so… Build and test #35: Commit 29df93e pushed by trongnhanuit
2m 17s main
main
2m 17s
Fix bug #44: don't try zero blength if new_root_lower_regions is null… Build and test #34: Commit 0a6b2fc pushed by trongnhanuit
10m 4s main
main
10m 4s
Merge branch 'main' of https://github.com/iqtree/cmaple Build and test #33: Commit d450c52 pushed by trongnhanuit
3m 12s main
main
3m 12s
Revert "Merge branch 'main' into main" Build and test #32: Commit 9241a98 pushed by SR-Martin
3m 30s main
main
3m 30s
Merge branch 'main' into main Build and test #31: Commit 6dbf95a pushed by SR-Martin
6m 44s main
main
6m 44s
only add -lomp if it's not in CMAKE_EXE_LINKER_FLAGS Build and test #30: Commit 46f86a9 pushed by trongnhanuit
56s main
main
56s
avoid redundant linkings Build and test #29: Commit 162691c pushed by trongnhanuit
8m 7s main
main
8m 7s
move annotation strings backward behind the branch lengths to make it… Build and test #28: Commit d830c79 pushed by trongnhanuit
8m 14s main
main
8m 14s
remove searching non-existent files Build and test #27: Commit 47517dc pushed by trongnhanuit
8m 30s main
main
8m 30s
fix compilation errors on Windows Build and test #26: Commit c75a00c pushed by trongnhanuit
8m 27s main
main
8m 27s
Show an error if the root frequency of any state is zero Build and test #25: Commit 62efdd5 pushed by trongnhanuit
8m 26s main
main
8m 26s
Bug fixed in outputting tree with branch supports (aLRT-SH) Build and test #24: Commit 24d0f25 pushed by trongnhanuit
8m 29s main
main
8m 29s
update CI for Windows Build and test #23: Commit 4a5d62c pushed by trongnhanuit
8m 5s main
main
8m 5s
update CI Build and test #22: Commit f3c2915 pushed by trongnhanuit
8m 20s main
main
8m 20s
update workflow to build cmaple-aa Build and test #21: Commit d144ea9 pushed by trongnhanuit
6m 12s main
main
6m 12s
Change to use HAVE_UNISTDH instead of CMAPLE_HAS_UNISTDH to avoid com… Build and test #20: Commit e3ca941 pushed by trongnhanuit
2m 10s main
main
2m 10s
reduce cmake req to 3.5 Build and test #19: Commit 3946f47 pushed by bqminh
5m 39s main
main
5m 39s
protein stuff is now only on with -DUSE_CMAPLE_AA=ON Build and test #18: Commit 3b55088 pushed by bqminh
6m 13s main
main
6m 13s
avoid the warning "memcpy will always overflow" Build and test #17: Commit 0091941 pushed by trongnhanuit
8m 6s main
main
8m 6s
comment out the unused method ASSERT Build and test #16: Commit 68aea18 pushed by trongnhanuit
4m 4s main
main
4m 4s
Revert "downgrade CMake requirement to 3.0 to make it consistent with… Build and test #15: Commit d69a954 pushed by trongnhanuit
3m 52s main
main
3m 52s
downgrade CMake requirement to 3.0 to make it consistent with IQTREE Build and test #14: Commit c7a73f4 pushed by trongnhanuit
8m 11s main
main
8m 11s
Avoid warnings due to policies Build and test #13: Commit faa9cb1 pushed by trongnhanuit
8m 7s main
main
8m 7s
Check maple alignments Build and test #12: Commit ad2bd9f pushed by SR-Martin
8m 35s main
main
8m 35s