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ms609
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@ms609 ms609 commented Oct 9, 2025

The text and example output both imply 100 generations here; either the code snippet needs updating to match, or I'm misunderstanding something basic...

The text and example output both imply 100 generations here; either the code snippet needs updating to match, or I'm misunderstanding something basic...
@bredelings
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Hopefully someone who is more familiar with PPS than I am could comment here... I was initially thinking that maybe there were 100 MCMC analyses of length 10000, but honestly I cannot tell from a brief look at the code.

@wrightaprilm
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Ben's understanding is correct. 10,000 MCMC generations for each of the 100 datasets.

@ms609
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ms609 commented Oct 10, 2025

OK, that makes sense, thanks. I was thrown by the output stopping at generation 100. Perhaps indicating that this output is truncated (per proposed edit) would clarify the expectation?

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3 participants