Bioinformatician with a focus on building pipelines for use on HPC systems.
- Fort Collins, CO
- biorrw.github.io
- in/reedwoyda
Highlights
- Pro
Pinned Loading
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Reads2Resistome
Reads2Resistome PublicHybrid and non-hybrid whole genome assembler with resistome identification for Illumina, PacBio and Nanopore reads.
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AMR-and-Virulence-factor-visualization-in-R
AMR-and-Virulence-factor-visualization-in-R PublicR script to generate heatmaps from AMR and Virulence Factor presence/absence data
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Random-R-Scripts-heatmaps-and-clustering
Random-R-Scripts-heatmaps-and-clustering PublicScript to make pheatmaps with metadata in R using presence/absence (or continuous) contingency tables
R 1
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Nextflow-Adventures
Nextflow-Adventures PublicRepository full of Nextflow Examples and Tutorials
Nextflow 3
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HPC-Mini-VM-Cluster
HPC-Mini-VM-Cluster PublicRepository containing my HPC mini VM cluster I am building
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