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@Genentech

Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. BRAID BRAID Public

    BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

    207 9

  2. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 121 18

  3. scimilarity scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Python 211 13

  4. polygraph polygraph Public

    Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

    Jupyter Notebook 34

  5. gReLU gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 269 42

  6. gneprop gneprop Public

    GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

    Python 6

Repositories

Showing 10 of 122 repositories
  • spex-tools Public
    Genentech/spex-tools’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 2, 2025
  • nfnull Public
    Genentech/nfnull’s past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Aug 1, 2025
  • jmpost Public
    Genentech/jmpost’s past year of commit activity
    R 17 4 54 (1 issue needs help) 1 Updated Aug 1, 2025
  • phase1b Public
    Genentech/phase1b’s past year of commit activity
    R 11 4 14 1 Updated Jul 31, 2025
  • decima Public

    Decima is a Python library to train sequence models on single-cell RNA-seq data.

    Genentech/decima’s past year of commit activity
    Jupyter Notebook 42 8 3 0 Updated Jul 28, 2025
  • checked Public

    batch R CMD check management

    Genentech/checked’s past year of commit activity
    R 8 1 15 1 Updated Jul 24, 2025
  • beignet Public

    A standard library for biological research.

    Genentech/beignet’s past year of commit activity
    Jupyter Notebook 28 MIT 7 29 29 Updated Jul 22, 2025
  • sc_simvar Public
    Genentech/sc_simvar’s past year of commit activity
    Python 1 0 0 0 Updated Jul 16, 2025
  • gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Genentech/gReLU’s past year of commit activity
    Python 269 MIT 42 22 6 Updated Jul 8, 2025
  • BayesERtools Public
    Genentech/BayesERtools’s past year of commit activity
    R 6 1 4 1 Updated Jul 7, 2025

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