GitHub - ModelDBRepository/117204: Working memory circuit with branched dendrites (Morita 2008)

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
SWMdend1.m		SWMdend1.m
SWMdend1_wofig.m		SWMdend1_wofig.m
readme.html		readme.html
screenshot1.jpg		screenshot1.jpg
screenshot2.jpg		screenshot2.jpg
screenshot3.jpg		screenshot3.jpg
screenshot4.jpg		screenshot4.jpg
simulation_example.m		simulation_example.m

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<html><pre>
This is the readme for the model associated with the paper

Morita K (2008) Possible role of dendritic compartmentalization in the
spatial working memory circuit. J Neurosci 28:7699-724

"SWMdend1.m" is a code for a single simulation trial of the circuit model.

It can be tested as follows: (as described in the top part of the
M-file itself)

[stim, x0, out, soas] = SWMdend1([100 100],[0 200 400],...
[pi/12 0 1],[pi/12 0 15],1.6,[pi/8 0 24 0.05],[0.1 5 0.1], ...
[pi/12 0.3 0.1 0.1],0.05,[]);

this creates figures that are similar to Fig 6B, for example:

<img src="./screenshot1.jpg" alt="screenshot1">

<img src="./screenshot2.jpg" alt="screenshot2">

<img src="./screenshot3.jpg" alt="screenshot3">

<img src="./screenshot4.jpg" alt="screenshot4">

"simulation_example.m" is a code for systematically running
"SWMdend1.m" for a large number of parameter sets.

"SWMdend1.m" includes codes for drawing figures, but they would be
problematic for a large scale simulation, because there will appear
too many figures.
</pre></html>