Add coverage_mt option to annotate_sex which takes an optional precomputed coverage MT to use for ploidy imputation instead of remaking it.
#484
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… block ploidy estimates
…hub.com/broadinstitute/gnomad_methods into jg/annotate_sex_add_coverage_mt_option � Conflicts: � gnomad/sample_qc/pipeline.py
…ate_sex_add_frac_hom_alt_option' of https://github.com/broadinstitute/gnomad_methods into jg/annotate_sex_add_coverage_mt_option
mike-w-wilson
approved these changes
Sep 26, 2022
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Will currently fail tests because I am waiting on a PR in Hail: hail-is/hail#12195