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Update ancestry population names in gks method to always use v4 #687

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Update ancestry population names in gks method to always use v4 #687

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6 changes: 1 addition & 5 deletions gnomad/resources/grch38/gnomad.py
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Original file line number Diff line number Diff line change
Expand Up @@ -572,11 +572,7 @@ def gnomad_gks(
ht = ht.annotate(fraction_cov_over_20=coverage_ht[ht.locus].over_20)

# Retrieve ancestry groups from the imported POPS dictionary.
pops_list = (
list(POPS["v4" if data_type == "exomes" else "v3"])
if by_ancestry_group
else None
)
pops_list = list(POPS["v4"]) if by_ancestry_group else None

# Throw warnings if contradictory arguments are passed.
if by_ancestry_group and vrs_only:
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