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Lack of CLI configurability is an intentional design choice to ensure people get consistent runs on the same repo, ie its project configuration.

In a way, you are shifting the project configuration to another location and that is aligned with our goals but I'm still hesitant to open the door on this. A workaround would be to have your hook write the settings to a temp dir and to use --isolated --config <path>.

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@totoroot
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