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My first Python script: a simple algorithm to compare sequences with variable input region not relying on any additional packages.

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ffstghc/BLASTscript

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Simple BLAST algorithm that takes in two sequences that were created by https://web.expasy.org/randseq and searches for similarities or mutations element by element.

Features

  • Choose between three search modes:

    • Sequence matches
    • Sequence mutations
    • Defined sequence
  • Variable Input region (start + stop position)

  • Output of sequence length

  • Output of position of findings ("X123Y") (for matches / mutations)

  • Output of total amount of findings (for matches / mutations)

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My first Python script: a simple algorithm to compare sequences with variable input region not relying on any additional packages.

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