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tfscreen

Library for simulating and analyzing high-throughput screens of transcription factor function.

Nomenclature

  • condition: A growth condition defined by marker, selection, and iptg. A genotype will have the same average growth rate in the same condition.
  • sample: A tube growing under a specific growth condition. It is defined by replicate, marker, selection, and iptg.
  • timepoint: An aliquot of a given sample taken at a specific time. It is defined by replicate, marker, selection, iptg, and time.

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Simulate or analyze a high-throughput screen of a transcription factor library

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