Bugs when fine tuning the gpt2

[yanan1116]

Transformers Version: 4.8.2
Torch Version: 1.8.0

I am using the official script to fine tune the gpt2 on the csv files.
the script:
https://github.com/huggingface/transformers/blob/master/examples/pytorch/language-modeling/run_clm_no_trainer.py

train and validation file makeup:

df_train_ft_aug.rename(columns={'content': 'text'}).sample(frac=1).to_csv(train_file, index=False)
df_train_ft_aug.rename(columns={'content': 'text'}).sample(frac=0.2).to_csv(validation_file, index=False)

My shell command:

python -u ./run_clm_no_trainer.py \
                --num_train_epochs 7 \
                --train_file './fintune_csvs/stsa_train_finetune.csv' \
                --validation_file './fintune_csvs/stsa_test_finetune.csv'  \
                --model_name_or_path gpt2 \
                --per_device_train_batch_size 16 \
                --per_device_eval_batch_size 16 \
                --output_dir "./finetune_gpt2_stsa" \
                --preprocessing_num_workers 16 \
                --block_size 256 --overwrite_cache True

where ths csv files contain a column, named 'text' for fine tuning the model.

However, there are always errors below, suggesting the lengths of the dataloader

File "./run_clm_no_trainer.py", line 503, in
main()exts in chunks of 256 #12: 0%| | 0/1 [00:00<?, ?ba/s]
File "./run_clm_no_trainer.py", line 480, in main
for step, batch in enumerate(eval_dataloader):
File "/usr/local/lib/python3.6/dist-packages/accelerate/data_loader.py", line 289, in iter
for batch in super().iter():
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/dataloader.py", line 517, in next
data = self._next_data()
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/dataloader.py", line 557, in _next_data
data = self._dataset_fetcher.fetch(index) # may raise StopIteration
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/_utils/fetch.py", line 47, in fetch
return self.collate_fn(data)
File "/usr/local/lib/python3.6/dist-packages/transformers/data/data_collator.py", line 80, in default_data_collator
batch[k] = torch.tensor([f[k] for f in features])
ValueError: expected sequence of length 256 at dim 1 (got 52)

Next time I run it, it returns the similar error:

ValueError: expected sequence of length 168 at dim 1 (got 136)

Then I modified the input params of tokenizer:

tokenizer.pad_token = tokenizer.eos_token 
def tokenize_function(examples):
    return tokenizer(examples[text_column_name],) , padding=True, truncation=True )

This seems fix the problem. However, the generated texts are quite short after this change.
Any suggestions?

[LysandreJik]

Pinging @sgugger

[sgugger]

It's hard to investigate more without having the data. Adding padding when fine-tuning GPT-2 is a very bad idea when fine-tuning GPT-2, which does not have a padding token, and it shouldn't be necessary. Could you provide us with a reproducer that includes the data?

[yanan1116]

It's hard to investigate more without having the data. Adding padding when fine-tuning GPT-2 is a very bad idea when fine-tuning GPT-2, which does not have a padding token, and it shouldn't be necessary. Could you provide us with a reproducer that includes the data?

Thanks for your suggestion. I will check my data to meet the default setting of fine-tuning.
By the way, should the eos_token, , be append to the end of each sample ? (the text column in the csv files )
@sgugger

[sgugger]

If it's not done by the tokenizer, yes it should.

[yanan1116]

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[yanan1116]

@sgugger Hello, I try to reproduce this error. The texts above is the samples for finetuning for GPT2. It is the column of text.

train_file = './fintune_csvs/{}_train_finetune_32_{}.csv'.format(args.dsn, seed)
validation_file = './fintune_csvs/{}_test_finetune_32_{}.csv'.format(args.dsn, seed)


ds.df_train['text'] = ds.df_train['content'] + tokenizer_gpt2.eos_token
ds.df_test['text'] = ds.df_test['content'] + tokenizer_gpt2.eos_token

ds.df_train[['text']].sample(frac=1).to_csv(train_file, index=False)
ds.df_test[['text']].sample(frac=1).to_csv(validation_file, index=False)


model_output_path = "./finetune_gpt2/{}_32_{}".format(args.dsn, seed) 
os.system(
"CUDA_VISIBLE_DEVICES=1 python -u ./run_clm_no_trainer.py \
        --num_train_epochs {} \
        --train_file {} \
        --validation_file {} \
        --model_name_or_path gpt2 \
        --per_device_train_batch_size 16 \
        --per_device_eval_batch_size 16 \
        --output_dir {} \
        --preprocessing_num_workers 16 --overwrite_cache True \
        --block_size 256".format(args.ft_epochs, train_file, validation_file, model_output_path) ) 

run_clm_no_trainer.py is the official script from transformers repo.

When I use another dataset, which have longer sentences than this dataset, there is no error and the finetuning process is OK.

[yanan1116]

I also tried sentiment analysis dataset, which also consists of relatively short sentences. The error came out too.

[yanan1116]

Grouping texts in chunks of 256 #11: 100%|█████████████████████████████| 1/1 [00:00<00:00, 25.61ba/s]
Grouping texts in chunks of 256 #12: 100%|█████████████████████████████| 1/1 [00:00<00:00, 28.63ba/s]
Grouping texts in chunks of 256 #13: 100%|█████████████████████████████| 1/1 [00:00<00:00, 25.03ba/s]
Grouping texts in chunks of 256 #14: 100%|█████████████████████████████| 1/1 [00:00<00:00, 23.64ba/s]
Grouping texts in chunks of 256 #15: 100%|█████████████████████████████| 1/1 [00:00<00:00, 30.86ba/s]
08/20/2021 03:43:32 - INFO - main - ***** Running training *****
08/20/2021 03:43:32 - INFO - main - Num examples = 16
08/20/2021 03:43:32 - INFO - main - Num Epochs = 1 | 0/1 [00:00<?, ?ba/s]
08/20/2021 03:43:32 - INFO - main - Instantaneous batch size per device = 16
08/20/2021 03:43:32 - INFO - main - Total train batch size (w. parallel, distributed & accumulation) = 16
08/20/2021 03:43:32 - INFO - main - Gradient Accumulation steps = 1 | 0/1 [00:00<?, ?ba/s]
08/20/2021 03:43:32 - INFO - main - Total optimization steps = 1
0%| | 0/1 [00:00<?, ?it/s]Traceback (most recent call last):
File "./run_clm_no_trainer.py", line 503, in | 0/1 [00:00<?, ?ba/s]
main()
File "./run_clm_no_trainer.py", line 463, in main | 0/1 [00:00<?, ?ba/s]
for step, batch in enumerate(train_dataloader):
File "/usr/local/lib/python3.6/dist-packages/accelerate/data_loader.py", line 289, in iter
for batch in super().iter():
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/dataloader.py", line 517, in next
data = self._next_data()
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/dataloader.py", line 557, in _next_data
data = self._dataset_fetcher.fetch(index) # may raise StopIteration
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/_utils/fetch.py", line 47, in fetch
return self.collate_fn(data)
File "/usr/local/lib/python3.6/dist-packages/transformers/data/data_collator.py", line 80, in default_data_collator
batch[k] = torch.tensor([f[k] for f in features])
ValueError: expected sequence of length 135 at dim 1 (got 112)

[yanan1116]

I try another manner to organise the training corpus, as txt file:

with open (train_file, 'w') as f:
    f.write(" {} ".format(tokenizer_gpt2.eos_token).join(ds.df_train['content'].tolist()))

with open (validation_file, 'w') as f:
    f.write(" {} ".format(tokenizer_gpt2.eos_token).join(ds.df_test['content'].tolist()))

The error comes the same.

33%|███▎ | 1/3 [00:00<00:01, 1.33it/s]Traceback (most recent call last):
File "./run_clm_no_trainer.py", line 483, in
main()
File "./run_clm_no_trainer.py", line 460, in main
for step, batch in enumerate(eval_dataloader):
File "/usr/local/lib/python3.6/dist-packages/accelerate/data_loader.py", line 289, in iter
for batch in super().iter():
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/dataloader.py", line 517, in next
data = self._next_data()
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/dataloader.py", line 557, in _next_data
data = self._dataset_fetcher.fetch(index) # may raise StopIteration
File "/usr/local/lib/python3.6/dist-packages/torch/utils/data/_utils/fetch.py", line 47, in fetch
return self.collate_fn(data)
File "/usr/local/lib/python3.6/dist-packages/transformers/data/data_collator.py", line 80, in default_data_collator
batch[k] = torch.tensor([f[k] for f in features])
ValueError: expected sequence of length 256 at dim 1 (got 117)

[sgugger]

Yes, this all points out to your corpus being too short to form a full batch. You should use a lower batch size or a lower block size.