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the pangenome graph builder
Shell 444 45
Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs
C++ 219 44
implicit pangenome graph
Rust 67 6
linearize and simplify variation graphs using blocked partial order alignment
C++ 58 8
simple interface for all-way alignment with biWFA
A toolkit for exploring regions of variation in a variation graph
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Genotyping lots of samples with big pangenomes
agc rust bridge
lace up GFA files using panSN path name sub-ranges to coordinate the lacing
online variation graph induction
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