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1. UFISH-Team/U-FISH UFISH-Team/U-FISH Public

   Deep learning based spot detection for FISH images.

   Jupyter Notebook 23 6

2. UFISH-Team/U-HiC UFISH-Team/U-HiC Public

   Python

3. UFISH-Team/pDR-area-32gene-decode-example UFISH-Team/pDR-area-32gene-decode-example Public

   A example to decode MiP-Seq result using U-FISH enhanced image

   Jupyter Notebook

4. MGEscore MGEscore Public

   CellType Definition by Marker Genes Expression

   Python 3 1

5. Spatialspots Spatialspots Public

   This document explains how to use three functions to calculate kernel density estimation (KDE), Moran's I statistic, Correlation, Wasserstein distance.

   Python 3 1

6. SpatiaInSituPlots SpatiaInSituPlots Public

   Spatial InSitu plot including gene expression and cell type

   Jupyter Notebook 4