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Merged
merged 4 commits into from
Jan 5, 2019
Merged

Converts integrity check dialog to JavaFX #4559

merged 4 commits into from
Jan 5, 2019

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@tobiasdiez
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Moreover:

  • Show entry by reference and not by id. Fixes Integrity checker should link to entries via reference #2181.
  • Fixes a few issues that occurred when opening the entry editor by code from the integrity dialog
  • Reuse gridpane in entry editor (should have a slightly superior performance)
  • Improve display of progress dialog
  • Invoke copy files task using central task executor

image

Filtering (triggered by right-clicking the column):
image

  • Change in CHANGELOG.md described
  • Tests created for changes
  • Manually tested changed features in running JabRef
  • Screenshots added in PR description (for bigger UI changes)
  • Ensured that the git commit message is a good one
  • Check documentation status (Issue created for outdated help page at help.jabref.org?)

@tobiasdiez
Converts integrity check dialog to JavaFX
7269d27 
Moreover:
- Show entry by reference and not by id. Fixes #2181.
- Fixes a few issues that occurred when opening the entry editor by code from the integrity dialog
- Reuse gridpane in entry editor (should have a slightly superior performance)
- Improve display of progress dialog
- Invoke copy files task using central task executor
@tobiasdiez tobiasdiez added the status: ready-for-review Pull Requests that are ready to be reviewed by the maintainers label Dec 28, 2018
@Siedlerchr
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I would prefer the search as a field above the table but I'm happy that you added searching! For the checkboxes you probably need a select all / unselect all button to make it easier to select all items

@Siedlerchr
fix l10n
e4ba277 
fix aborting of copy files task and showing of integrity check dialog
@Siedlerchr
Merge remote-tracking branch 'upstream/master' into fixFocusCheck
e92ad3a 
* upstream/master:
  Bump checkstyle from 8.15 to 8.16 (#4562)
  Bump xmpbox from 2.0.12 to 2.0.13 (#4561)
  Delete the deprecated BibEntry Constructor (#4560)
  Refactor BibEntry deprecated method (#4554)
  Added extra stats to be sent with MrDLib recommendations (#4452)
  improve styling of preferences side menu (#4556)
  Cleanup interfaces (#4553)
@Siedlerchr
fix l10n
00b6f13
@tobiasdiez
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Thanks for the help @Siedlerchr

@tobiasdiez tobiasdiez merged commit e1cfec9 into master Jan 5, 2019
@tobiasdiez tobiasdiez deleted the fixFocusCheck branch January 5, 2019 16:18
Siedlerchr added a commit that referenced this pull request Jan 10, 2019
@Siedlerchr
Merge remote-tracking branch 'upstream/master' into ooPanel
50d1bd9 
* upstream/master:
  Add uncaught exception message (#4565)
  Converts integrity check dialog to JavaFX (#4559)
  Do not extract file ending from Urls (#4547)
  Bump checkstyle from 8.15 to 8.16 (#4562)
  Bump xmpbox from 2.0.12 to 2.0.13 (#4561)
  Delete the deprecated BibEntry Constructor (#4560)

# Conflicts:
#	src/main/java/org/jabref/gui/DialogService.java
#	src/main/java/org/jabref/gui/FXDialogService.java
#	src/main/java/org/jabref/gui/actions/CopyFilesAction.java
#	src/main/java/org/jabref/gui/util/CurrentThreadTaskExecutor.java
frasca80 pushed a commit to frasca80/jabref that referenced this pull request Jan 14, 2019
@tobiasdiez
Converts integrity check dialog to JavaFX (JabRef#4559)
9ea2164 
* Converts integrity check dialog to JavaFX

Moreover:
- Show entry by reference and not by id. Fixes JabRef#2181.
- Fixes a few issues that occurred when opening the entry editor by code from the integrity dialog
- Reuse gridpane in entry editor (should have a slightly superior performance)
- Improve display of progress dialog
- Invoke copy files task using central task executor

* fix l10n
fix aborting of copy files task and showing of integrity check dialog

* fix l10n
Siedlerchr added a commit that referenced this pull request Jan 20, 2019
@Siedlerchr
Merge remote-tracking branch 'upstream/master' into editStringsjavafx
3fa8648 
* upstream/master: (583 commits)
  update jfoenix and gradle plugins Replace outdated transformer log4j2 with official new one
  Update journalList.txt
  Fix for Issue #4437 - Some bugs in preference->Entry table columns (#4546)
  Don't set column sort type at startup (#4577)
  Add uncaught exception message (#4565)
  Converts integrity check dialog to JavaFX (#4559)
  Do not extract file ending from Urls (#4547)
  Bump checkstyle from 8.15 to 8.16 (#4562)
  Bump xmpbox from 2.0.12 to 2.0.13 (#4561)
  Delete the deprecated BibEntry Constructor (#4560)
  Refactor BibEntry deprecated method (#4554)
  Added extra stats to be sent with MrDLib recommendations (#4452)
  improve styling of preferences side menu (#4556)
  Cleanup interfaces (#4553)
  Bump fontbox from 2.0.12 to 2.0.13 (#4552)
  Bump pdfbox from 2.0.12 to 2.0.13 (#4551)
  Bump wiremock from 2.19.0 to 2.20.0 (#4550)
  Fixes that renaming a group did not change the group name in the interface (#4549)
  Bump applicationinsights-logging-log4j2 from 2.2.1 to 2.3.0 (#4540)
  Bump antlr4-runtime from 4.7.1 to 4.7.2 (#4542)
  ...

# Conflicts:
#	src/main/java/org/jabref/gui/JabRefFrame.java
#	src/main/java/org/jabref/model/entry/BibtexString.java
Siedlerchr pushed a commit that referenced this pull request Jan 25, 2019
@frasca80 @Siedlerchr
Fix for BibTex source tab parsing issue if field contains {} (#4581)
aa3657c 
* Cleanup interfaces (#4553)

* improve styling of preferences side menu (#4556)

* Added extra stats to be sent with MrDLib recommendations (#4452)

* Refactor BibEntry deprecated method (#4554)

* Refactor BibEntry deprecated method

* Fixed error

* More on checkstyle fixing

* Fixed checkstyle issues

* Added custom entrytype for types not registered in the enumerator.

* Added getTypeOrDefault method refactor code to use it and fix NPE problem

* Fixing checkstyle rules

* More on checkstyle

* More on getType getTypeOrDefault replacement

* Revert Article EntryType into Electronic

* Added break line between different packages

* Refactor BibtextEntryTypes.getTypeOrDefault method

* Removed unused import

* Removed extra new line, checkstyle error fixing

* Delete the deprecated BibEntry Constructor (#4560)

* Bump xmpbox from 2.0.12 to 2.0.13 (#4561)

Bumps xmpbox from 2.0.12 to 2.0.13.

Signed-off-by: dependabot[bot] <[email protected]>

* Bump checkstyle from 8.15 to 8.16 (#4562)

Bumps [checkstyle](https://github.com/checkstyle/checkstyle) from 8.15 to 8.16.
- [Release notes](https://github.com/checkstyle/checkstyle/releases)
- [Commits](checkstyle/checkstyle@checkstyle-8.15...checkstyle-8.16)

Signed-off-by: dependabot[bot] <[email protected]>

* Do not extract file ending from Urls (#4547)

* Fixes #4544 Do not extract file ending from Urls

* Add tests

* file type for any resource type

* Keep simple file name extraction for files

* checkstyle

* Converts integrity check dialog to JavaFX (#4559)

* Converts integrity check dialog to JavaFX

Moreover:
- Show entry by reference and not by id. Fixes #2181.
- Fixes a few issues that occurred when opening the entry editor by code from the integrity dialog
- Reuse gridpane in entry editor (should have a slightly superior performance)
- Improve display of progress dialog
- Invoke copy files task using central task executor

* fix l10n
fix aborting of copy files task and showing of integrity check dialog

* fix l10n

* Add uncaught exception message (#4565)

* Add error message for uncaught exceptions

Added a new view to the project. It's shown after the uncaught exception is logged.

* Add simple text to fallback error view

Added a label asking the user to look into the logfiles for more details.

* Add error message to language files

Added the error message to the german and english language files.

* Add ErrorDialogAndWait

Removed the FallbackErrorView. Added the showErrorDialogAndWait call instead.

* BibTex parser triggered on focus out of the text area instead of on value change event

* BibTex parser triggered on focus out of the text area instead of on value change event

* Added a post-parsing validation to be sure there's no relevant unconsidered content into epilog.
Added DialogService in SourceTab as current NotificationPane seems not working.

* Added a post-parsing validation to be sure there's no relevant unconsidered content into epilog.
Added DialogService in SourceTab as current NotificationPane seems not working.

* Codacy/PR Quality Review change.

* Codacy/PR Quality Review change.
Siedlerchr added a commit that referenced this pull request Jan 27, 2019
@Siedlerchr
Merge remote-tracking branch 'upstream/master' into jdk9
0a54822 
* upstream/master: (229 commits)
  Try to fix not on FX thread for search and autocomplete (#4618)
  Convert DuplicateResolverDialog to javafx (#4601)
  Fix for BibTex source tab parsing issue if field contains {} (#4581)
  Convert OO/LO SidePanel to javafx (#4341)
  Convert "Customize importer" dialog to JavaFX (#4608)
  Convert "From Aux file" dialog to JavaFX (#4607)
  Convert "Show preferences" dialog to JavaFX (#4605)
  Fix not on FX thread exception
  Force javafx to run thread (#4604)
  Convert new version dialog to JavaFX (#4602)
  Add a variable to track the change in preview style (#4587)
  Solution for submitting dialog with Ctrl + Enter (#4496) (#4592)
  Bump mysql-connector-java from 8.0.13 to 8.0.14 (#4599)
  Fix overlapping font in id entry type (#4595)
  update jfoenix and gradle plugins Replace outdated transformer log4j2 with official new one
  Update journalList.txt
  Fix for Issue #4437 - Some bugs in preference->Entry table columns (#4546)
  Don't set column sort type at startup (#4577)
  Add uncaught exception message (#4565)
  Converts integrity check dialog to JavaFX (#4559)
  ...

# Conflicts:
#	build.gradle
#	src/main/java/org/jabref/gui/FindUnlinkedFilesDialog.java
#	src/main/java/org/jabref/gui/JabRefFrame.java
#	src/main/java/org/jabref/gui/fieldeditors/EditorTextArea.java
#	src/main/java/org/jabref/gui/fieldeditors/EditorTextField.java
#	src/main/java/org/jabref/gui/openoffice/CitationManager.java
#	src/main/java/org/jabref/gui/openoffice/OOBibBase.java
#	src/main/java/org/jabref/gui/openoffice/OpenOfficePanel.java
#	src/main/java/org/jabref/gui/openoffice/OpenOfficeSidePanel.java
github-actions bot pushed a commit to CaptainDaVinci/jabref that referenced this pull request Feb 15, 2020
Squashed 'src/main/resources/csl-styles/' changes from c531528..9e81857
1f1e116 
9e81857 Update marine-ornithology.csl (JabRef#4566)
938537e Update government-and-opposition.csl (JabRef#4564)
50d0635 Update annales-de-demographie-historique.csl (JabRef#4560)
42b54d9 Create marine-ornithology.csl (JabRef#4559)
eff41bb Create dermatology-online.csl (JabRef#4558)
3911696 Update journal-of-forensic-sciences.csl (JabRef#4554)
059ea33 Small capitals and categories (JabRef#4556)
97b8c84 Create CSL Styles: estudios_hispanicos.csl (JabRef#4557)
57e0f9d Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4552)
f481ea3 Create ipb-ppki-3.csl (JabRef#4550)
899d302 Update journal-of-neolithic-archaeology.csl (JabRef#4553)
e106215 Create annales-de-demographie-historique.csl (JabRef#4512)
4dd974e Create lauterbornia.csl (JabRef#4525)
e5277ae Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4551)
f9cfe40 Add new IOP dependents (JabRef#4549)
daff985 Create brazilian-journal-of-veterinary-research-and-animal-science.csl (JabRef#4544)
10c6fa8 Update ens-de-lyon-centre-d-ingenierie-documentaire.csl (JabRef#4545)

git-subtree-dir: src/main/resources/csl-styles
git-subtree-split: 9e81857
github-actions bot pushed a commit that referenced this pull request Feb 15, 2020
Squashed 'src/main/resources/csl-styles/' changes from c531528..9e81857
c25b135 
9e81857 Update marine-ornithology.csl (#4566)
938537e Update government-and-opposition.csl (#4564)
50d0635 Update annales-de-demographie-historique.csl (#4560)
42b54d9 Create marine-ornithology.csl (#4559)
eff41bb Create dermatology-online.csl (#4558)
3911696 Update journal-of-forensic-sciences.csl (#4554)
059ea33 Small capitals and categories (#4556)
97b8c84 Create CSL Styles: estudios_hispanicos.csl (#4557)
57e0f9d Update sciences-po-ecole-doctorale-note-french.csl (#4552)
f481ea3 Create ipb-ppki-3.csl (#4550)
899d302 Update journal-of-neolithic-archaeology.csl (#4553)
e106215 Create annales-de-demographie-historique.csl (#4512)
4dd974e Create lauterbornia.csl (#4525)
e5277ae Update sciences-po-ecole-doctorale-note-french.csl (#4551)
f9cfe40 Add new IOP dependents (#4549)
daff985 Create brazilian-journal-of-veterinary-research-and-animal-science.csl (#4544)
10c6fa8 Update ens-de-lyon-centre-d-ingenierie-documentaire.csl (#4545)

git-subtree-dir: src/main/resources/csl-styles
git-subtree-split: 9e81857
github-actions bot pushed a commit to abepolk/jabref that referenced this pull request Feb 15, 2020
Squashed 'src/main/resources/csl-styles/' changes from e71363e..9e81857
ed98896 
9e81857 Update marine-ornithology.csl (JabRef#4566)
938537e Update government-and-opposition.csl (JabRef#4564)
50d0635 Update annales-de-demographie-historique.csl (JabRef#4560)
42b54d9 Create marine-ornithology.csl (JabRef#4559)
eff41bb Create dermatology-online.csl (JabRef#4558)
3911696 Update journal-of-forensic-sciences.csl (JabRef#4554)
059ea33 Small capitals and categories (JabRef#4556)
97b8c84 Create CSL Styles: estudios_hispanicos.csl (JabRef#4557)
57e0f9d Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4552)
f481ea3 Create ipb-ppki-3.csl (JabRef#4550)
899d302 Update journal-of-neolithic-archaeology.csl (JabRef#4553)
e106215 Create annales-de-demographie-historique.csl (JabRef#4512)
4dd974e Create lauterbornia.csl (JabRef#4525)
e5277ae Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4551)
f9cfe40 Add new IOP dependents (JabRef#4549)
daff985 Create brazilian-journal-of-veterinary-research-and-animal-science.csl (JabRef#4544)
10c6fa8 Update ens-de-lyon-centre-d-ingenierie-documentaire.csl (JabRef#4545)
c531528 create mcgill9-en.csl, Canadian McGill legal style (JabRef#4532)
e2416fa Update clinical-and-experimental-optometry.csl (JabRef#4538)

git-subtree-dir: src/main/resources/csl-styles
git-subtree-split: 9e81857
github-actions bot pushed a commit to NikodemKch/jabref-1 that referenced this pull request Feb 15, 2020
Squashed 'src/main/resources/csl-styles/' changes from 059ea33..9e81857
fea0ce6 
9e81857 Update marine-ornithology.csl (JabRef#4566)
938537e Update government-and-opposition.csl (JabRef#4564)
50d0635 Update annales-de-demographie-historique.csl (JabRef#4560)
42b54d9 Create marine-ornithology.csl (JabRef#4559)
eff41bb Create dermatology-online.csl (JabRef#4558)
3911696 Update journal-of-forensic-sciences.csl (JabRef#4554)

git-subtree-dir: src/main/resources/csl-styles
git-subtree-split: 9e81857
github-actions bot pushed a commit to calixtus/jabref that referenced this pull request Feb 17, 2020
Squashed 'src/main/resources/csl-styles/' changes from c531528..aa52aaa
187038c 
aa52aaa Encrypt Travis CI notification email addresses (JabRef#4570)
d8f2843 Update ayer.csl (JabRef#4569)
448e67e Create ayer.csl (JabRef#4565)
bf1ddae Update springer-basic-author-date.csl (JabRef#4562)
db525ac Update american-journal-of-physical-anthropology.csl (JabRef#4567)
9e81857 Update marine-ornithology.csl (JabRef#4566)
938537e Update government-and-opposition.csl (JabRef#4564)
50d0635 Update annales-de-demographie-historique.csl (JabRef#4560)
42b54d9 Create marine-ornithology.csl (JabRef#4559)
eff41bb Create dermatology-online.csl (JabRef#4558)
3911696 Update journal-of-forensic-sciences.csl (JabRef#4554)
059ea33 Small capitals and categories (JabRef#4556)
97b8c84 Create CSL Styles: estudios_hispanicos.csl (JabRef#4557)
57e0f9d Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4552)
f481ea3 Create ipb-ppki-3.csl (JabRef#4550)
899d302 Update journal-of-neolithic-archaeology.csl (JabRef#4553)
e106215 Create annales-de-demographie-historique.csl (JabRef#4512)
4dd974e Create lauterbornia.csl (JabRef#4525)
e5277ae Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4551)
f9cfe40 Add new IOP dependents (JabRef#4549)
daff985 Create brazilian-journal-of-veterinary-research-and-animal-science.csl (JabRef#4544)
10c6fa8 Update ens-de-lyon-centre-d-ingenierie-documentaire.csl (JabRef#4545)

git-subtree-dir: src/main/resources/csl-styles
git-subtree-split: aa52aaa
github-actions bot pushed a commit to systemoperator/jabref that referenced this pull request Feb 26, 2020
Squashed 'src/main/resources/csl-styles/' changes from c531528..f03dece
0fd0891 
f03dece Bump nokogiri from 1.10.7 to 1.10.8 (JabRef#4580)
31bacc1 JCL: Fix formatting & space before locator
adfc9b0 Add The Journal of Comparative Law (JabRef#4576)
599d39c Create uni-freiburg-geschichte.csl (JabRef#4561)
3ad8d40 Add Begell House styles (JabRef#4575)
223527b Create begell-apa.csl (JabRef#4574)
d73b9a9 Update journal-of-neolithic-archaeology.csl (JabRef#4572)
5b2810c Create anatomical-sciences-education.csl (JabRef#4573)
9454897 Update ASA style
b3c6efd Reorder/reindent (JabRef#4571)
aa52aaa Encrypt Travis CI notification email addresses (JabRef#4570)
d8f2843 Update ayer.csl (JabRef#4569)
448e67e Create ayer.csl (JabRef#4565)
bf1ddae Update springer-basic-author-date.csl (JabRef#4562)
db525ac Update american-journal-of-physical-anthropology.csl (JabRef#4567)
9e81857 Update marine-ornithology.csl (JabRef#4566)
938537e Update government-and-opposition.csl (JabRef#4564)
50d0635 Update annales-de-demographie-historique.csl (JabRef#4560)
42b54d9 Create marine-ornithology.csl (JabRef#4559)
eff41bb Create dermatology-online.csl (JabRef#4558)
3911696 Update journal-of-forensic-sciences.csl (JabRef#4554)
059ea33 Small capitals and categories (JabRef#4556)
97b8c84 Create CSL Styles: estudios_hispanicos.csl (JabRef#4557)
57e0f9d Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4552)
f481ea3 Create ipb-ppki-3.csl (JabRef#4550)
899d302 Update journal-of-neolithic-archaeology.csl (JabRef#4553)
e106215 Create annales-de-demographie-historique.csl (JabRef#4512)
4dd974e Create lauterbornia.csl (JabRef#4525)
e5277ae Update sciences-po-ecole-doctorale-note-french.csl (JabRef#4551)
f9cfe40 Add new IOP dependents (JabRef#4549)
daff985 Create brazilian-journal-of-veterinary-research-and-animal-science.csl (JabRef#4544)
10c6fa8 Update ens-de-lyon-centre-d-ingenierie-documentaire.csl (JabRef#4545)

git-subtree-dir: src/main/resources/csl-styles
git-subtree-split: f03dece
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@tobiasdiez @Siedlerchr