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Junke Kris Wang edited this page Jul 3, 2025 · 41 revisions

Welcome to the 2025 Cold Spring Harbor Single Cell Course wiki! (Navin lab parts).

We'll be covering most of the single-cell RNA seq and spatial transcriptomics parts of the course. Here are the list of workshops:

Workshop Instructors
1 scRNA: Processing Basics Lei Yang and Jerome Lin
2 scDNA: CopyKit Kris Wang
3 scRNA: Copy Number Inference Rui Ye
4 scRNA: Integration Ryan Mulqueen and Lei Yang
5 Spatial RNA: VisiumHD Chenling Tang and Aatish Thennavan
Lecture Instructors
Single Cell Genomics Overview Nick Navin
Introduction to Spatial Transcriptomics Aatish Thennavan
scDNA data analysis using CopyKit Kris Wang

Thanks from the Navin lab team and hopefully it goes smoothly!!

Our on-site instructors:

Nick Aatish Ryan Lei Kris Rui
Nick

Our off-site instructors:

Mitchell Chenling Jerome
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