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@awaelchli awaelchli commented Jan 3, 2023

What does this PR do?

Unblocks master.
The test started failing over night with:

strategies/test_bagua_strategy.py:64: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
../../src/pytorch_lightning/trainer/trainer.py:602: in fit
    call._call_and_handle_interrupt(
../../src/pytorch_lightning/trainer/call.py:36: in _call_and_handle_interrupt
    return trainer.strategy.launcher.launch(trainer_fn, *args, trainer=trainer, **kwargs)
../../src/pytorch_lightning/strategies/launchers/subprocess_script.py:88: in launch
    return function(*args, **kwargs)
../../src/pytorch_lightning/trainer/trainer.py:644: in _fit_impl
    self._run(model, ckpt_path=self.ckpt_path)
../../src/pytorch_lightning/trainer/trainer.py:1078: in _run
    self.strategy.setup(self)
../../src/pytorch_lightning/strategies/bagua.py:209: in setup
    self._configure_bagua_model(trainer)
../../src/pytorch_lightning/strategies/bagua.py:221: in _configure_bagua_model
    self.model = self._setup_model(model)
../../src/pytorch_lightning/strategies/bagua.py:234: in _setup_model
    return BaguaDistributedDataParallel(
/usr/local/lib/python3.9/dist-packages/bagua/torch_api/data_parallel/distributed.py:148: in __init__
    self.inner = BaguaDistributedDataParallel(
/usr/local/lib/python3.9/dist-packages/bagua/torch_api/data_parallel/bagua_distributed.py:153: in __init__
    self._bagua_init_algorithm()
/usr/local/lib/python3.9/dist-packages/bagua/torch_api/data_parallel/bagua_distributed.py:400: in _bagua_init_algorithm
    self._bagua_autotune_register_tensors()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <bagua.torch_api.data_parallel.bagua_distributed.BaguaDistributedDataParallel object at 0x7f7551791490>

     def _bagua_autotune_register_tensors(self):
        """
        Register tensors on autotune server, and return first bucketing suggestions
        """
        autotune_tensor_list = [
            TensorDeclaration(
                {
                    "name": tensor.bagua_tensor_name,
                    "num_elements": tensor.numel(),
                    "dtype": to_bagua_datatype(tensor.dtype),
                }
            )
            for tensor in self._bagua_tensors
        ]
    
        rsp = self._bagua_autotune_client.register_tensors(
            model_name=self.bagua_module_name,
            tensor_list=autotune_tensor_list,
        )
>       assert rsp.status_code == 200, "Unexpected rsp={}".format(rsp)
E       AssertionError: Unexpected rsp=<Response [500]>

/usr/local/lib/python3.9/dist-packages/bagua/torch_api/data_parallel/bagua_distributed.py:372: AssertionError

Bagua version installed: bagua-cuda116==0.9.1

Does your PR introduce any breaking changes? If yes, please list them.

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cc @Borda @awaelchli @wangraying

@github-actions github-actions bot added the pl Generic label for PyTorch Lightning package label Jan 3, 2023
@awaelchli awaelchli added this to the v1.8.x milestone Jan 3, 2023
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⚡ Required checks status: All passing 🟢

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These checks are required after the changes to tests/tests_pytorch/strategies/test_bagua_strategy.py.

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🟢 pytorch_lightning: Azure HPU
Check ID Status
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🟢 pytorch_lightning: Azure IPU
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pytorch-lightning (IPUs) success

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Thank you for your contribution! 💜

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@Borda Borda enabled auto-merge (squash) January 3, 2023 12:39
@Borda Borda merged commit f9ae89f into master Jan 3, 2023
@Borda Borda deleted the tests/skip-bagua-error branch January 3, 2023 14:31
lexierule pushed a commit that referenced this pull request Jan 4, 2023
* [App] Introduce basic auth to Lightning CLI (#16105)

* Introduce basic auth to Lightning CLI for app creation

* Parsing creds added

* Adding auth field to app instance body

* Adding tests

* Adding changelog entry

* Adding more tests


* Update runtime.py

* Setting auth on update

* Fix test

* Update lightning-cloud dep

* Apply suggestions from code review

Co-authored-by: Adrian Wälchli <[email protected]>

* Update runtime.py

* Fix for release

* Update base.txt

Co-authored-by: Jirka Borovec <[email protected]>
Co-authored-by: Adrian Wälchli <[email protected]>

* docs: fix order of on_fit_start() hook (#16180)

Fixes #16170

* docs: updated broken links (#16191)

Co-authored-by: Shashwat <shashwat>
Fixes #16186

* Always use the local rank zero imports (#16178)

* update BYOC documentation with AWS details (#16044)

Co-authored-by: Adrian Wälchli <[email protected]>

* Using internal ip + port in a load balancer instead of URL exposed (#16119)

Co-authored-by: thomas chaton <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Remove CUDA_LAUNCH_BLOCKING from Lite tests (#16177)

* simplify torch.Tensor (#16190)

* Fix inclusion of `model_parallel` document (#16197)

fix link to gpu/advanced section

* Update numpy requirement from <1.23.1,>=1.17.2 to >=1.17.2,<1.24.1 in /requirements (#16199)

Update numpy requirement in /requirements

Updates the requirements on [numpy](https://github.com/numpy/numpy) to permit the latest version.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v1.17.2...v1.24.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Update s3fs requirement from <2022.8.3,>=2022.5.0 to >=2022.5.0,<2022.11.1 in /requirements (#16198)

Update s3fs requirement in /requirements

Updates the requirements on [s3fs](https://github.com/fsspec/s3fs) to permit the latest version.
- [Release notes](https://github.com/fsspec/s3fs/releases)
- [Changelog](https://github.com/fsspec/s3fs/blob/main/release-procedure.md)
- [Commits](fsspec/s3fs@2022.5.0...2022.11.0)

---
updated-dependencies:
- dependency-name: s3fs
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* ci: upload only with release (#16194)

* Update endpoint access examples: added info about accessing auth-protected apps (#16145)

* Skip a failing Bagua test for manual optimization (#16225)

* Fix type error when dividing chunk size in colossalai strategy (#16212)


Co-authored-by: awaelchli <[email protected]>

* Fix DDP on XLA (#16020)

Co-authored-by: awaelchli <[email protected]>

* Added support and test for custom artifact names in WandbLogger (#16173)

* Update ipython[all] requirement from <8.6.1 to <8.7.1 in /requirements (#16220)

Updates the requirements on [ipython[all]](https://github.com/ipython/ipython) to permit the latest version.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@rel-0.8.4...8.7.0)

---
updated-dependencies:
- dependency-name: ipython[all]
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Improvements to checkpoint migration (#16233)

Co-authored-by: Justus Schock <[email protected]>

* Support arbitrary `Optimizable`s as optimizers (#16189)

* Differences with master

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: Dmitry Frolov <[email protected]>
Co-authored-by: Jirka Borovec <[email protected]>
Co-authored-by: Adrian Wälchli <[email protected]>
Co-authored-by: David Gilbertson <[email protected]>
Co-authored-by: Shashwat Agrawal <[email protected]>
Co-authored-by: Raphael Randschau <[email protected]>
Co-authored-by: thomas chaton <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: HELSON <[email protected]>
Co-authored-by: Liyang90 <[email protected]>
Co-authored-by: Manan Goel <[email protected]>
Co-authored-by: Justus Schock <[email protected]>
carmocca added a commit that referenced this pull request Jan 4, 2023
* [App] Introduce basic auth to Lightning CLI (#16105)

* Introduce basic auth to Lightning CLI for app creation

* Parsing creds added

* Adding auth field to app instance body

* Adding tests

* Adding changelog entry

* Adding more tests


* Update runtime.py

* Setting auth on update

* Fix test

* Update lightning-cloud dep

* Apply suggestions from code review

Co-authored-by: Adrian Wälchli <[email protected]>

* Update runtime.py

* Fix for release

* Update base.txt

Co-authored-by: Jirka Borovec <[email protected]>
Co-authored-by: Adrian Wälchli <[email protected]>

* docs: fix order of on_fit_start() hook (#16180)

Fixes #16170

* docs: updated broken links (#16191)

Co-authored-by: Shashwat <shashwat>
Fixes #16186

* Always use the local rank zero imports (#16178)

* update BYOC documentation with AWS details (#16044)

Co-authored-by: Adrian Wälchli <[email protected]>

* Using internal ip + port in a load balancer instead of URL exposed (#16119)

Co-authored-by: thomas chaton <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Remove CUDA_LAUNCH_BLOCKING from Lite tests (#16177)

* simplify torch.Tensor (#16190)

* Fix inclusion of `model_parallel` document (#16197)

fix link to gpu/advanced section

* Update numpy requirement from <1.23.1,>=1.17.2 to >=1.17.2,<1.24.1 in /requirements (#16199)

Update numpy requirement in /requirements

Updates the requirements on [numpy](https://github.com/numpy/numpy) to permit the latest version.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v1.17.2...v1.24.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Update s3fs requirement from <2022.8.3,>=2022.5.0 to >=2022.5.0,<2022.11.1 in /requirements (#16198)

Update s3fs requirement in /requirements

Updates the requirements on [s3fs](https://github.com/fsspec/s3fs) to permit the latest version.
- [Release notes](https://github.com/fsspec/s3fs/releases)
- [Changelog](https://github.com/fsspec/s3fs/blob/main/release-procedure.md)
- [Commits](fsspec/s3fs@2022.5.0...2022.11.0)

---
updated-dependencies:
- dependency-name: s3fs
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* ci: upload only with release (#16194)

* Update endpoint access examples: added info about accessing auth-protected apps (#16145)

* Skip a failing Bagua test for manual optimization (#16225)

* Fix type error when dividing chunk size in colossalai strategy (#16212)


Co-authored-by: awaelchli <[email protected]>

* Fix DDP on XLA (#16020)

Co-authored-by: awaelchli <[email protected]>

* Added support and test for custom artifact names in WandbLogger (#16173)

* Update ipython[all] requirement from <8.6.1 to <8.7.1 in /requirements (#16220)

Updates the requirements on [ipython[all]](https://github.com/ipython/ipython) to permit the latest version.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@rel-0.8.4...8.7.0)

---
updated-dependencies:
- dependency-name: ipython[all]
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Improvements to checkpoint migration (#16233)

Co-authored-by: Justus Schock <[email protected]>

* Support arbitrary `Optimizable`s as optimizers (#16189)

* Differences with master

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: Dmitry Frolov <[email protected]>
Co-authored-by: Jirka Borovec <[email protected]>
Co-authored-by: Adrian Wälchli <[email protected]>
Co-authored-by: David Gilbertson <[email protected]>
Co-authored-by: Shashwat Agrawal <[email protected]>
Co-authored-by: Raphael Randschau <[email protected]>
Co-authored-by: thomas chaton <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: HELSON <[email protected]>
Co-authored-by: Liyang90 <[email protected]>
Co-authored-by: Manan Goel <[email protected]>
Co-authored-by: Justus Schock <[email protected]>
carmocca added a commit that referenced this pull request Jan 4, 2023
* [App] Introduce basic auth to Lightning CLI (#16105)

* Introduce basic auth to Lightning CLI for app creation

* Parsing creds added

* Adding auth field to app instance body

* Adding tests

* Adding changelog entry

* Adding more tests

* Update runtime.py

* Setting auth on update

* Fix test

* Update lightning-cloud dep

* Apply suggestions from code review

Co-authored-by: Adrian Wälchli <[email protected]>

* Update runtime.py

* Fix for release

* Update base.txt

Co-authored-by: Jirka Borovec <[email protected]>
Co-authored-by: Adrian Wälchli <[email protected]>

* docs: fix order of on_fit_start() hook (#16180)

Fixes #16170

* docs: updated broken links (#16191)

Co-authored-by: Shashwat <shashwat>
Fixes #16186

* Always use the local rank zero imports (#16178)

* update BYOC documentation with AWS details (#16044)

Co-authored-by: Adrian Wälchli <[email protected]>

* Using internal ip + port in a load balancer instead of URL exposed (#16119)

Co-authored-by: thomas chaton <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Remove CUDA_LAUNCH_BLOCKING from Lite tests (#16177)

* simplify torch.Tensor (#16190)

* Fix inclusion of `model_parallel` document (#16197)

fix link to gpu/advanced section

* Update numpy requirement from <1.23.1,>=1.17.2 to >=1.17.2,<1.24.1 in /requirements (#16199)

Update numpy requirement in /requirements

Updates the requirements on [numpy](https://github.com/numpy/numpy) to permit the latest version.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v1.17.2...v1.24.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Update s3fs requirement from <2022.8.3,>=2022.5.0 to >=2022.5.0,<2022.11.1 in /requirements (#16198)

Update s3fs requirement in /requirements

Updates the requirements on [s3fs](https://github.com/fsspec/s3fs) to permit the latest version.
- [Release notes](https://github.com/fsspec/s3fs/releases)
- [Changelog](https://github.com/fsspec/s3fs/blob/main/release-procedure.md)
- [Commits](fsspec/s3fs@2022.5.0...2022.11.0)

---
updated-dependencies:
- dependency-name: s3fs
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* ci: upload only with release (#16194)

* Update endpoint access examples: added info about accessing auth-protected apps (#16145)

* Skip a failing Bagua test for manual optimization (#16225)

* Fix type error when dividing chunk size in colossalai strategy (#16212)

Co-authored-by: awaelchli <[email protected]>

* Fix DDP on XLA (#16020)

Co-authored-by: awaelchli <[email protected]>

* Added support and test for custom artifact names in WandbLogger (#16173)

* Update ipython[all] requirement from <8.6.1 to <8.7.1 in /requirements (#16220)

Updates the requirements on [ipython[all]](https://github.com/ipython/ipython) to permit the latest version.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@rel-0.8.4...8.7.0)

---
updated-dependencies:
- dependency-name: ipython[all]
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Improvements to checkpoint migration (#16233)

Co-authored-by: Justus Schock <[email protected]>

* Support arbitrary `Optimizable`s as optimizers (#16189)

* Differences with master

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: Dmitry Frolov <[email protected]>
Co-authored-by: Jirka Borovec <[email protected]>
Co-authored-by: Adrian Wälchli <[email protected]>
Co-authored-by: David Gilbertson <[email protected]>
Co-authored-by: Shashwat Agrawal <[email protected]>
Co-authored-by: Raphael Randschau <[email protected]>
Co-authored-by: thomas chaton <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: HELSON <[email protected]>
Co-authored-by: Liyang90 <[email protected]>
Co-authored-by: Manan Goel <[email protected]>
Co-authored-by: Justus Schock <[email protected]>
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@awaelchli
After an investigation of this problem, I found that this failure is caused by scikit-optimize library used by Bagua. In detail, scikit-optimize library currently uses an old builtin type of numpy (i.e., numpy.int), which is deprecated by numpy>=1.24.0.

To avoid this problem, users can choose to use numpy<1.24.0.

In the meantime, scikit-optimize is trying to fix this problem (PR: scikit-optimize/scikit-optimize#1123). After that, users can use the updated scikit-optimize with numpy>=1.24.0 in Bagua.

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